PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY61779.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

MYB

Protein Properties

Length: 244aa MW: 28626.7 Da PI: 9.1814

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY61779.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.4e-16	4	44	6	47
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 + Ede+l ++v+++G+++W++Ia++++ gR++k+c++rw++ GAY61779.1 4 PAEDEKLRELVERYGPHNWNAIAEKLQ-GRSGKSCRLRWFNQ 44 67***********************.*********996 PP
2	Myb_DNA-binding	55.6	1.2e-17	51	94	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l+ ++ +G++ W+ Iar ++ gRt++ +k++w+ GAY61779.1 51 RSPFTEEEEERLLASHRIHGNR-WAVIARLFP-GRTDNAVKNHWHV 94 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MYRPAEDEKL RELVERYGPH NWNAIAEKLQ GRSGKSCRLR WFNQLDPRIN RSPFTEEEEE 60 RLLASHRIHG NRWAVIARLF PGRTDNAVKN HWHVIMARRC RERSRLYAKR AAQTFLNDQK 120 SSSSSRPNHH AQTGCTDLET KNNNLASFVE IFRGRFHYST YPHNQLQFFR ELCDGNTSHL 180 GSKKEDKNQP VEFYDFLQVN TDSTKSEVID TARRDDEEVD QEARVQRNAS SGVQFIDFLS 240 VRNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	3e-85	MYB family protein