PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY61949.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GRAS
Protein Properties Length: 460aa    MW: 51707.4 Da    PI: 5.1707
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY61949.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS314.91.8e-96764593374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 +lL ecA+a+s++d +++++lL+ l+elasp+gd  q+la+yf++AL  + ++s++++yk+l++ ++++++ +++ +    f+evsP+ +f+h++ N a
  GAY61949.1  76 KLLKECARAISDKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKTLTSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGA 174
                 7999**********************************************************9999985554444444445****************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledleleeLrvkpg 199
                 Ilea++ge+++HiiD++ + ++QWp+Ll+aLa+R++++p+l++T+v+  +s  +  ++e+g+r++kfA+ +gvpfef+v+   +rl +l+  +L vk++
  GAY61949.1 175 ILEALDGETKLHIIDMSNTLCTQWPTLLEALATRNDETPHLKLTVVVT-ASLVRLVMKEIGQRMEKFARLMGVPFEFKVItGLNRLVELTKGTLGVKED 272
                 ************************************************.55799*************************94456*************** PP

        GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse..sFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 Ea+aVn++ +l r+      +e+ r +v+++++sl+Pkvv++ve+ead++s+  +F++ f e+l++y+  f++le+++ ++s+er ++Ere  +r+iv 
  GAY61949.1 273 EAVAVNCIGALRRVA-----VEE-RGAVIQMFQSLKPKVVTIVEEEADLTSSryDFVKCFEECLRFYTLYFEMLEESFVPTSNERLMLERE-CSRDIVR 364
                 **************8.....444.89**********************9665459************************************.89***** PP

        GRAS 297 vvac.............egaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve..eesgslv.lgWkdrpLvsvSaWr 374
                 v+ac             +++e  er+e+ ++W e+l+ea F+pv +s+++++++k+ll+++  ++g  +   +++ s + l+Wk++p+v++SaW+
  GAY61949.1 365 VLACdddnnssnngngdREEEECERRERGSQWAEKLKEAAFSPVGFSDDVVDDVKALLKRYRaGWGLVLPqgDDNTSGIyLTWKEEPVVWASAWK 459
                 ****33333222222221234568999***********************************999988875544444444**************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    
MDITLFSPKG THSHHFFSLS NQQLQQSNGD QIALDMQTNN NNNIQPQNSC HTSTSRSSDS  60
GEPCADTTGG NKWASKLLKE CARAISDKDS SKIHHLLWML NELASPYGDC DQKLASYFLQ  120
ALFCKATESG QRCYKTLTSV AEKSHSFDSA RKLILKFQEV SPWTTFGHVA SNGAILEALD  180
GETKLHIIDM SNTLCTQWPT LLEALATRND ETPHLKLTVV VTASLVRLVM KEIGQRMEKF  240
ARLMGVPFEF KVITGLNRLV ELTKGTLGVK EDEAVAVNCI GALRRVAVEE RGAVIQMFQS  300
LKPKVVTIVE EEADLTSSRY DFVKCFEECL RFYTLYFEML EESFVPTSNE RLMLERECSR  360
DIVRVLACDD DNNSSNNGNG DREEEECERR ERGSQWAEKL KEAAFSPVGF SDDVVDDVKA  420
LLKRYRAGWG LVLPQGDDNT SGIYLTWKEE PVVWASAWKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-138GRAS family protein