PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY61961.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C3H
Protein Properties Length: 340aa    MW: 39564 Da    PI: 8.2927
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY61961.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.92.6e-06163179622
                 -SGGGGTS--TTTTT-S CS
     zf-CCCH   6 CrffartGtCkyGdrCk 22 
                 C+f+++tG C++G rC+
  GAY61961.1 163 CHFHLKTGACRFGQRCS 179
                 ****************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MDKSYLIQNT TFQLLLPKYS FPPKLPRSEK SLTSKLSKSA QRWREEGKTG HNGAGQHDKC  60
SHVSNRCHPS PHLDTYPPIR RWGCRELATY PPLAHQLRRV LGASRIWRRK ENECDEDDDW  120
EYVEEGPAEI IWQGNEIIIR KKKVKVPKKD ANPLSKKEDK AHCHFHLKTG ACRFGQRCSI  180
VHFYPDKSCT LLIKNMYNGP GLAWEQDEGL EEDLAVEKGH EEKKKNIALK ASKHESDEES  240
ELDDEELAML ARRFRKFYMK TNERGKFRNY KNKKEMKEPI TCYECKKPGH IRPECSLLNK  300
LKKKAMVATD EETSDDEKQQ EITNLALMAF GEKSCDELDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10320.13e-34C3H family protein