PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY61990.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 196aa    MW: 21995.7 Da    PI: 8.6409
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY61990.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.7e-11249454
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +h ++Er+RR+++N+ +  Lr+l P     + k+ + a+i   ++++Ik+L
  GAY61990.1  2 SHIAVERNRRRQMNEHLKVLRSLTPCF---YIKRGDQASIIGGVIDFIKEL 49
                89************************9...9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MSHIAVERNR RRQMNEHLKV LRSLTPCFYI KRGDQASIIG GVIDFIKELH QVLQALESKK  60
QRKSLSPSPS PRPVLLHQLS PQQPPDININ SFGAEHFKEL GACCNSSVAD VEAKISGSNV  120
LLKVISKQIP GQIVKIITVL EKLSFEVLHL NISTMEDTVL YSFVIKIRLE CQLSLEELAL  180
EVQKSFLPNA VYANDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.13e-85bHLH family protein