PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY62084.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NAC

Protein Properties

Length: 241aa MW: 28363.3 Da PI: 6.4183

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY62084.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	24.3	8.9e-08	2	36	1	36
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevike 36 +p+GfrF+Ptdeel+ + L+ kv+g++++l+ +++e GAY62084.1 2 VPKGFRFNPTDEELI-QILESKVSGQQMPLHFTLPE 36 589**********.88*******988555555 PP
2	NAM	39.5	1.7e-12	36	113	55	128
NAM 55 ekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlsk..kgel.....vglkktLvfy.....kgrapkgektdWvmheyrl 128 e+e y ++ r++ +r + +g Wkat + k+++++ + +g k+ L+f+ + +++++ kt+W+mhey+l GAY62084.1 36 ENERYCYCMREND-------SReVSGRGWWKATSHVKKIYATnnN--GscadvIGYKRPLTFHkfkdtRRNRSNAIKTNWIMHEYTL 113 4555666665543.......3437789************8551..245555******7766546777889*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MVPKGFRFNP TDEELIQILE SKVSGQQMPL HFTLPENERY CYCMRENDSR EVSGRGWWKA 60 TSHVKKIYAT NNNGSCADVI GYKRPLTFHK FKDTRRNRSN AIKTNWIMHE YTLHSLSTDW 120 TLCKIKYKGK PSVQEELEDI RNDYRLRVNN DFEASSSSSI SVTNMDMQQH SADSVAEQQL 180 QQQQQQPQPL QQLEQQQQYA SYDPFSTQTM STGYDYFNDH DHQLEQAHTS EQPFTTLWSW 240 Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	5e-18	NAC family protein