PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY62120.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 203aa    MW: 23146.2 Da    PI: 4.619
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY62120.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1042e-3281261128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGf+F Ptdeelv ++L +k++  +++  ++i+e++   ++Pw+L+ ++  + ++wyfFs+ +         +r+t +gyWk+   +++v+++ g++
  GAY62120.1   8 LPPGFKFLPTDEELVLHFLYPKASLLPCHP-NIIPELNPQLHDPWQLNGRALCSGNRWYFFSQIED--------KRVTGNGYWKQLDFEEPVINSAGKK 97 
                 79*************************999.89**************976667899******9866........599********************** PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 +g+kk +vf  g+ap g++t+W+m+ey+l
  GAY62120.1  98 IGMKKYFVFCVGEAPLGVETNWIMQEYHL 126
                 ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MCDRTINLPP GFKFLPTDEE LVLHFLYPKA SLLPCHPNII PELNPQLHDP WQLNGRALCS  60
GNRWYFFSQI EDKRVTGNGY WKQLDFEEPV INSAGKKIGM KKYFVFCVGE APLGVETNWI  120
MQEYHLCSCG ASANKSYKRR GNRILVSEGC CKWVLCRVYE EDGNSKGFCH GDDDDDDNGT  180
ELSCLDEMFL SLDDDLSDVS FPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.12e-54NAC family protein