PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY62565.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 230aa    MW: 25810.2 Da    PI: 6.2346
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY62565.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.76e-1860110256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr ++ +g+Wv+eIr p++   + r++lg+f tae+Aa+a++ a+++++g+
  GAY62565.1  60 TYRGVRMRS-WGKWVSEIRQPRK---KSRIWLGSFPTAEMAARAHDVAALAIKGH 110
                 69****998.**********843...6***********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MDTDDKNFSS YSPSSTPTSK RSSKSQQANK EFMSPTIDNE NESNKKICNN GANALNKYPT  60
YRGVRMRSWG KWVSEIRQPR KKSRIWLGSF PTAEMAARAH DVAALAIKGH SAHLNFPELA  120
DELPRPASAA PKDIQAAAAK AAAAAIFDSP RRIEANNDTQ STCHDENKNS ADHHDHSSSD  180
DRDSAWFDHL PDLSLEGDDG KNRFCDSSWW QQAEFGHMGF QFEEILCWDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.16e-40ERF family protein