PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY62653.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 234aa    MW: 25991.8 Da    PI: 10.0778
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY62653.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM69.49.5e-22131317128
         NAM   7 FhPtd.eelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkya..tgkrknratksgyWkatgkdkevlsk.kgelvg 101
                 F Ptd +  vv+y k+k    +    ++i+e+d+++v    +      +ek+ yfFs+ ++++a  ++ + + a+ sgyWk  gk++++l++ ++++vg
  GAY62653.1  13 FAPTDgKSSVVHYVKRKFGPLP--GLSIIPELDVVSVSSLWFG-----QEKKRYFFSNIRNESAidNDGKCKIAAGSGYWKPVGKNRQILASgTKQVVG 104
                 89999445788*****998777..4468********9765553.....67899***99888877434555555999**************9967778** PP

         NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                 ++ktL+f +g++ + +kt+Wvmh+y+l
  GAY62653.1 105 IRKTLIFCEGKRGHETKTQWVMHQYHL 131
                 *************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MGETKSKLCV NGFAPTDGKS SVVHYVKRKF GPLPGLSIIP ELDVVSVSSL WFGQEKKRYF  60
FSNIRNESAI DNDGKCKIAA GSGYWKPVGK NRQILASGTK QVVGIRKTLI FCEGKRGHET  120
KTQWVMHQYH LVAIATNTNL TQPVFKMVII GDWVVYRIFQ RKKKPKKRGV VSSNNLNITK  180
NSHKNQLQVI DFSVIEADQT DLLGPPPQPV SSCSSEITAD ELSPSVLDQE ETSA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160167QRKKKPKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.19e-29NAC family protein