PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY62884.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family YABBY
Protein Properties Length: 186aa    MW: 20791.6 Da    PI: 4.6846
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY62884.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY23.12.2e-07209085157
       YABBY  85 nvekeesastsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaa 157
                 n+ k    +++ ++ kl++ ++++ +r +++ + P+k +r Psa+  f+ e  +  k +nP+++   a   aa
  GAY62884.1  20 NDRKV--GKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAA 90 
                 44433..3455566679999999999999********************999999*********999998877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MKGAKGKGAA RVSQEALKPN DRKVGKRKAA TAKLDSGSKR QGKREKKAKK DPNKPKRPPS  60
AFFVFLEEFR KTFKKENPNV TAVSAVGKAA GGKWKSMSPA EKAPYESKAE KLKSEYGKKM  120
NAYNKKQDGD EASDKSKSEV NDEDEASGEE EHQLEPEPEP EPEQEQDEDE DEEVEEDEDD  180
EEDDDD