PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY62950.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family HD-ZIP
Protein Properties Length: 127aa    MW: 14889.1 Da    PI: 10.5138
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY62950.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.98.5e-192479256
                T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +++++f++eq++ Le+ Fe+ + ++  +++ + A++lgL+ rqV +WFqN+Ra++k
  GAY62950.1 24 KNKRRFSDEQIRLLESIFESeSTKLEPRKKMQVATELGLQPRQVAIWFQNKRARWK 79
                56789**************88**********************************9 PP
2HD-ZIP_I/II124.16.4e-4025114290
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                  +krr+s+eq++lLE+ Fe+e+ kLep++K+++a+eLglqprqva+WFqn+RAR+k+kq+E+dy++L+++yd+l++  e+L ke+e+L  e
   GAY62950.1  25 NKRRFSDEQIRLLESIFESEStKLEPRKKMQVATELGLQPRQVAIWFQNKRARWKSKQIEHDYAQLRANYDSLASGFESLIKEKESLLLE 114
                  79****************9999***************************************************************99755 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MIERRKDDSA ASPEAKRKKK SKMKNKRRFS DEQIRLLESI FESESTKLEP RKKMQVATEL  60
GLQPRQVAIW FQNKRARWKS KQIEHDYAQL RANYDSLASG FESLIKEKES LLLEVIIAFP  120
ESNFSGN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1420RRKDDSAASPEAKRKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61890.12e-33HD-ZIP family protein