PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY62972.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GATA
Protein Properties Length: 293aa    MW: 32040.5 Da    PI: 6.6036
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY62972.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.11.8e-16215251135
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg ++  Tp++Rrgp+g++tLCnaCGl+++ kg+
  GAY62972.1 215 CRHCGISEksTPMMRRGPEGPRTLCNACGLMWANKGT 251
                 *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MDHGSNPQMQ MSDEQHSIHH VNYVPEHELH HISNGDVMDD EHDEGNGVGE SEAMEGDAPS  60
DPGSLSDNRA IAEIGDQLTL SFQGQVYVFD SVSPEKVQAV LLLLGGREVP STTPAIPITN  120
NQNNRGLPGT PQRLSVPQRL ASLIRFREKR KERNFEKKIR YTVRKEVALR MQRNKGQFTS  180
AKSNNEDSAS AISSWGSNQS WAGDVNGSQN QDIVCRHCGI SEKSTPMMRR GPEGPRTLCN  240
ACGLMWANKG TLRDLSKAAP QAGQTSSLNK NEENGTLKAE QVIRAAGNIN GST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.21e-117GATA family protein