PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY63288.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

WRKY

Protein Properties

Length: 230aa MW: 25811.1 Da PI: 9.465

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY63288.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.5	2.5e-32	152	210	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk++++prsYYrCt+ +C+vkk+ver aedp++v++tYeg+H h+ GAY63288.1 152 LDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHS 210 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MSSTSQAMLN QSLFEGQEMP TQMGFFPFAS NLNFAPLGNQ SLKAFPSSLA AADVPSTINL 60 TETLLSSAAA AGNLKQTTCD NLGGGAQLLS LQRSSANLWA WGGDVNECLS NKRTVDDHHL 120 GVAAMKMKKI KSRRKVREPR FCFKTMSDID VLDDGYKWRK YGQKVVKNTQ HPRSYYRCTQ 180 DNCRVKKRVE RLAEDPRMVI TTYEGRHVHS PSHDQEDSSQ ASSHLNNFFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39410.1	7e-64	WRKY family protein