PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY63294.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 220aa    MW: 25427.2 Da    PI: 9.2453
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY63294.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.92.8e-1153103655
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 + +E++RRd+++s  ++L +l+P+  +ka++  ls  + L +A+ YIk+L+
  GAY63294.1  53 KNIEKNRRDHMKSLCFKLFSLVPShHFKASKSMLSQEDQLDLACCYIKQLR 103
                 579*********************999999999****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MIFPFRNCLY NGLHNSSDSF NSLYNLSYWR EEVSKEWKRM KKRSDQSSKL DRKNIEKNRR  60
DHMKSLCFKL FSLVPSHHFK ASKSMLSQED QLDLACCYIK QLRERIDKLN RMKGQAMKSI  120
KPNSNNNIMD ETNNICSNLP VVELRDLGSS IEVVLISGVQ RNFMLYEVIS ILEEEGAQVV  180
SASFSTIGDK IFHTVRAQAK ISRLGVETSI ACQRLHDLVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-24bHLH family protein