PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY63434.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

C2H2

Protein Properties

Length: 211aa MW: 23014 Da PI: 8.1023

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY63434.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.9	3.7e-05	186	208	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ C+k+F++ L++H + H GAY63434.1 186 SCSSCSKTFNSENALQSHTKAkH 208 6*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MEFWGVEVKA GQPLKVKPNF DNIIHLSQAS LGESKKEKGH DSVPLFVKFG DKKLVLGTLI 60 PDNIPQLSFD LVFEKEFELS HNWKNGSIYF CGYQTPLPMD SSDEFDMGDS DEEEQEELPS 120 ITAVAENVGK KRPTESATKT PVPAKKAKTP MSDGKKGVHV ATPHPSKGVK TPNAKTQTPK 180 SGGQVSCSSC SKTFNSENAL QSHTKAKHSA K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G44750.2	3e-38	C2H2 family protein