PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY63471.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NF-YB

Protein Properties

Length: 210aa MW: 23155.9 Da PI: 8.1673

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY63471.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	180.7	1.2e-56	22	117	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdrflPianvsrimkk lPanakisk+aketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yv plk+yl+kyre+egek GAY63471.1 22 KEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEGEK 117 79********************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MTGKRNQTSP IGSPTSGNIS DKEQDRFLPI ANVSRIMKKS LPANAKISKE AKETVQECVS 60 EFISFITGEA SDKCQREKRK TINGDDLLWA MTTLGFENYV GPLKIYLNKY RETEGEKNSM 120 ARQEDQAANP NPSHAAAAEI NKANNSFSSS DNKADFQNFN MGFYSLGAQV APNSNGQGTR 180 VMGYGENLGV EAFNLSRIYE VMSNYIKGIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	3e-67	NF-YB family protein