PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY63541.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 234aa    MW: 26628.1 Da    PI: 7.1989
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY63541.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.54.3e-0784129454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  h ++Er RR+r ++ +  L ++lP+      +K++K +i++ A + I++L
  GAY63541.1  84 RHVINERMRRERERQNYLALHSILPPG-----TKNDKNSIVKTAANMIHEL 129
                 5899*********************97.....8***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MDEFLGDQFH GEGDIFFWLD NEALPVNQSA FVAYANRPRT EFVSQNAGNG SNSLSANKRM  60
IQFLRKIQPA KMEHPELDSE RGHRHVINER MRRERERQNY LALHSILPPG TKNDKNSIVK  120
TAANMIHELR CCKQELERKN YELESNLGLK NGGTKIRVNV DNPTSGVDSM LEVLKCLKDL  180
GSSTRSIQAE FSDQKLTAVL DIETQMGAGA VEKDVQRALQ KVEDKLLFRH YQEG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19095RMRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.11e-39bHLH family protein