PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY63576.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

NF-YB

Protein Properties

Length: 211aa MW: 23688.1 Da PI: 6.1559

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY63576.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	179.6	2.8e-56	38	133	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdrflPianv+rimkkv+P+n+kiskdaketvqecvsefisfvt+easdkcqrekrktingdd++wa++tlGfedyv+plk+yl+kyre+egek GAY63576.1 38 KEQDRFLPIANVGRIMKKVIPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKLYLSKYREIEGEK 133 89*******************************************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MEDDSHGNGP NGPDGGSPES PCVKSSGSNS NNNNHNNKEQ DRFLPIANVG RIMKKVIPGN 60 GKISKDAKET VQECVSEFIS FVTGEASDKC QREKRKTING DDIIWAITTL GFEDYVAPLK 120 LYLSKYREIE GEKLNIPKQQ RSEQRVQQQQ SSHEHEQQLP YSSVYSSTNL MSQSPFMATD 180 HHHQSFPLPF SPNSIQKQLQ PQDQIDSVGN W

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G13570.1	3e-70	NF-YB family protein