PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY63841.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family LBD
Protein Properties Length: 224aa    MW: 24639.4 Da    PI: 6.6904
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY63841.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260125.13.3e-3971071100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+k+Cv+apyf++eq + +fa++hk+FGasnv+kll++lp ++r +a+ ++ yeA+ar++dP+yG+v++i++lq+q+ +l+a+la+lk
  GAY63841.1   7 PCGACKFLRRKCVKGCVFAPYFCHEQgATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVSHIFALQHQVVNLQAQLASLK 105
                 7*************************89********************************************************************999 PP

      DUF260  99 ee 100
                 e+
  GAY63841.1 106 EQ 107
                 87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MTGSGSPCGA CKFLRRKCVK GCVFAPYFCH EQGATHFAAI HKVFGASNVS KLLAHLPVSD  60
RCEAAVTISY EAQARLQDPI YGCVSHIFAL QHQVVNLQAQ LASLKEQAAQ SILNGSVTTN  120
PNHEKYYGKL PSHPQDVHSW FHHQENSEME RLFSSNLHNQ GAATMPYCTD QNGFMNPNSL  180
GNSYENSAIA SFGEASHSMG TFEQWSFQDS DDLQSVAFGY IQNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.15e-76LBD family protein