PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY63998.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

TALE

Protein Properties

Length: 346aa MW: 38542.4 Da PI: 5.9251

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY63998.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.1	1.7e-09	274	307	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yps+ ++ LA+++gL+++q+ +WF N+R ++ GAY63998.1 274 WPYPSEPQKLALAESTGLDQKQINNWFINQRKRH 307 58*****************************885 PP
2	ELK	35.4	2.4e-12	227	248	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK+qLlr Ysg+LgsLkqEF+ GAY63998.1 227 DLKDQLLRRYSGSLGSLKQEFL 248 6********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MESGGTSSTR NPNCWMVLGE SSSNNNGNVN NNMNGSLCSI MMMNSSAGTT SDHNNKAFLP 60 PNLMMPPPQQ QEVQYDCTDN SSNSIKAGIF AHPHFPRLLA SYVNCQKVGA PAQVVARLDE 120 ACASGEAIMS RSSAGTAASR VGDDPALDQF MEAYCEMLTK YEQELTKPFK DASLFLSEID 180 AQLKTLTVSS NISVVVAFGD SAGQSGSSEE EIDVKDHCID PLAEDRDLKD QLLRRYSGSL 240 GSLKQEFLKK KKKGKLPKEA RQLLLDWWSR HHRWPYPSEP QKLALAESTG LDQKQINNWF 300 INQRKRHWKP SEDMQFVMMD AAYPQYYMEN GVGNPFPMDC TTLARF

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MESGGTSSTR NPNCWMVLGE SSSNNNGNVN NNMNGSLCSI MMMNSSAGTT SDHNNKAFLP  60
PNLMMPPPQQ QEVQYDCTDN SSNSIKAGIF AHPHFPRLLA SYVNCQKVGA PAQVVARLDE  120
ACASGEAIMS RSSAGTAASR VGDDPALDQF MEAYCEMLTK YEQELTKPFK DASLFLSEID  180
AQLKTLTVSS NISVVVAFGD SAGQSGSSEE EIDVKDHCID PLAEDRDLKD QLLRRYSGSL  240
GSLKQEFLKK KKKGKLPKEA RQLLLDWWSR HHRWPYPSEP QKLALAESTG LDQKQINNWF  300
INQRKRHWKP SEDMQFVMMD AAYPQYYMEN GVGNPFPMDC TTLARF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	3e-97	TALE family protein