PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY64250.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 113aa    MW: 12977.8 Da    PI: 8.4498
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY64250.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.22.6e-1221882083
                HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEE CS
          B3 20 kkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFk 83
                 + ++e+      g+   s+ l++ede+g++W ++l +r+++ r  ++++GW+ Fv +++ ++gD vvF 
  GAY64250.1 21 SNTIDEFflafeAGQ--YSQNLVVEDENGERWPFRLFIRQGPYRkPTISAGWRCFVMSKQAEVGDQVVFI 88
                333333344434444..4568***************88777766699**********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    
MEVYSKILTE TDVSTRLAVE SNTIDEFFLA FEAGQYSQNL VVEDENGERW PFRLFIRQGP  60
YRKPTISAGW RCFVMSKQAE VGDQVVFIKE RAGAIGSAFR YKIRVSKTTE AIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.11e-10ARF family protein