PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY64393.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family M-type_MADS
Protein Properties Length: 66aa    MW: 7312.9 Da    PI: 11.2034
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY64393.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF48.79.4e-161556142
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                k+ien+  r +tfskRr gi KKA+EL +L++ ++a+++fs 
  GAY64393.1 15 KKIENEGGRLITFSKRRSGIYKKASELMTLTGSKIAILLFSL 56
                68*************************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 66 aa     Download sequence    
MAAKKTKGRQ KIEMKKIENE GGRLITFSKR RSGIYKKASE LMTLTGSKIA ILLFSLLGLC  60
ALLKAQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.16e-17M-type_MADS family protein