PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY64394.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family M-type_MADS
Protein Properties Length: 172aa    MW: 20146.1 Da    PI: 10.0352
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY64394.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF31.52.2e-101541127
                S---SHHHHHHHHHHHHHHHHHHHHHH CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeEL 27
                k+ien+  r +tfskRr gi KKA+E+
  GAY64394.1 15 KKIENEDDRLITFSKRRSGIYKKASEI 41
                68************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MAGKKTKRRQ KIEMKKIENE DDRLITFSKR RSGIYKKASE IWEAIHLCQP SVKAIANRFL  60
GMSQLHNDNI HPLVKAYSHA RINELNQQHN DLLRQLDEEK EQQKMLKQMR RVKETQPRWW  120
ETPVDELNLQ ELLQMDSAVD DLHQTFLAKI NEKTAAAAAS SSVAPPMYFH NK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04100.18e-25M-type_MADS family protein