PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY64397.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family M-type_MADS
Protein Properties Length: 99aa    MW: 11871.5 Da    PI: 10.5292
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY64397.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF24.43.7e-081539125
                S---SHHHHHHHHHHHHHHHHHHHH CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAe 25
                k+ien+  r +tfskRr gi KK +
  GAY64397.1 15 KKIENEDDRLITFSKRRSGIYKKGH 39
                68*********************76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
MAAKKTKGRQ KIEIKKIENE DDRLITFSKR RSGIYKKGHH TPLNQQPHDN THPLVEAHRH  60
VRINELNQQH NELLRQLDEE KELEKNLKQM RRGNETQLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04100.11e-13M-type_MADS family protein