PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY64615.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 235aa    MW: 25808.2 Da    PI: 5.213
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY64615.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.5e-1179125554
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +  rE+ RRdr+N++f eL ++l +    + +K +Ka+iL  Av+ + +L
  GAY64615.1  79 KACREKLRRDRLNERFLELGSMLEPG---RPPKTDKATILSDAVQMMEQL 125
                 678**********************8...89***************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MEIASSDNSD WLIDYSIVDD IPIAGNFDWP SQAAPAVNAS SAASVTIDCS FGDSDGPKEV  60
EAGSRKRLRS ESCCVSGSKA CREKLRRDRL NERFLELGSM LEPGRPPKTD KATILSDAVQ  120
MMEQLRTEAQ KLKQSNEDLQ EKIKELKAEK NELRDEKQRL KADKEKLEQQ VKAMSAPSGF  180
LPHPSSMSAA FAAQSQVAGN KLVPFIGYPG VAMWQFMPPA AVDTSQDHVL RPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.15e-84bHLH family protein