PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY64616.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

bHLH

Protein Properties

Length: 209aa MW: 22773.7 Da PI: 4.6289

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY64616.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.7	0.00023	67	99	19	54
HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +f eL ++l + + +K +Ka+iL Av+ + +L GAY64616.1 67 RFLELGSMLEPG---RPPKTDKATILSDAVQMMEQL 99 788999999997...78***************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MEIASSDNSD WLIDYSIVDD IPIAGNFDWP SQAAPAVNAS SAASVTIDCS FGDSDGPKEV 60 EAGSRKRFLE LGSMLEPGRP PKTDKATILS DAVQMMEQLR TEAQKLKQSN EDLQEKIKEL 120 KAEKNELRDE KQRLKADKEK LEQQVKAMSA PSGFLPHPSS MSAAFAAQSQ VAGNKLVPFI 180 GYPGVAMWQF MPPAAVDTSQ DHVLRPPVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G54680.1	4e-66	bHLH family protein