PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY64780.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family HD-ZIP
Protein Properties Length: 223aa    MW: 25792.6 Da    PI: 5.0891
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY64780.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.78.5e-183991456
                -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                +++f++eq++ Le +Fe++  p  +++ ++A++lgL+ rqV +WFqN+Ra+ k
  GAY64780.1 39 KRRFSDEQVKSLEFMFESEARPESRMKHRMADELGLQPRQVAIWFQNKRARSK 91
                568************************************************99 PP
2HD-ZIP_I/II105.63.8e-3438129293
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  +krr+s+eqvk+LE +Fe+e + e++ K+++a eLglqprqva+WFqn+RAR ktkq+E++y++Lk+++++l+++ e +++e+++L  +l++
   GAY64780.1  38 NKRRFSDEQVKSLEFMFESEARPESRMKHRMADELGLQPRQVAIWFQNKRARSKTKQIEHEYTKLKAEFETLASSYELMRREHQSLLVQLQK 129
                  79************************************************************************************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MNSEIPERTA AAAVKFRGLN LDWTDMQQPI ASFGTGNNKR RFSDEQVKSL EFMFESEARP  60
ESRMKHRMAD ELGLQPRQVA IWFQNKRARS KTKQIEHEYT KLKAEFETLA SSYELMRREH  120
QSLLVQLQKL KNLLGKGHED TNENSGDGKS ENEITTESNE RPSQIYVPSS DDRSRNIEST  180
VIMKDFAATN VEEQTESSGN WCKFESGFLD ETSSTLPWWE LWS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.15e-31HD-ZIP family protein