PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY64846.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family ERF
Protein Properties Length: 201aa    MW: 22830.7 Da    PI: 5.1494
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY64846.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.23.5e-174493255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++GVr +  +++Wv+e+r+p   +k+ r++lg++ t+e+Aa+a++ a+++l+g
  GAY64846.1 44 IFRGVRMRN-NNKWVCELREP---NKKSRIWLGTYPTPEMAARAHDVAALALRG 93
                59****999.8*********8...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MDCISSQGEL LTHTQTTKFN YRLATSSPKK RAGRRVFRET RHPIFRGVRM RNNNKWVCEL  60
REPNKKSRIW LGTYPTPEMA ARAHDVAALA LRGKSACLNF ADSAWRLPVP ASADADDVRK  120
AAAEAAEAFR LSHDDEDQFE ENGLLPEKNV FYMDEEAVFD MPGLLVNMAE GLLLSPPPLL  180
IGCEYDDDDD DTKWNDYIWG H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.11e-47ERF family protein