PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY64921.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GATA
Protein Properties Length: 121aa    MW: 13886.2 Da    PI: 11.0553
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY64921.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA627.3e-205589135
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                Cs+C tt+Tp+WR gp g+ktLCnaCG++y++ +l
  GAY64921.1 55 CSHCETTQTPQWRMGPLGPKTLCNACGVRYKSGRL 89
                *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MPPEQKAQAR VMMRKRVAPA PLADYNNSCV VANNYKKQKG RRRERIVQQQ QQRKCSHCET  60
TQTPQWRMGP LGPKTLCNAC GVRYKSGRLL PEYRPAASPT FDGDKHSNFH KKILKKKGFM  120
G
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11439RKRVAPAPLADYNNSCVVANNYKKQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.22e-31GATA family protein