PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY64942.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family M-type_MADS
Protein Properties Length: 78aa    MW: 9146.38 Da    PI: 7.6865
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY64942.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF40.14.7e-132351144
                HHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
      SRF-TF 11 vtfskRrngilKKAeELSvLCdaevaviifsstg 44
                +tfskRr gi KKA+EL +L++ae+ ++ +s+ +
  GAY64942.1  2 ITFSKRRSGIHKKASELVTLTGAEIGIVRISELN 35
                7***************************999866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    
MITFSKRRSG IHKKASELVT LTGAEIGIVR ISELNQQHNE LLCWLDEENA REKILNQNRK  60
GKETQPHWWE TPVDEVKH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.12e-11M-type_MADS family protein