PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY64943.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family M-type_MADS
Protein Properties Length: 69aa    MW: 7592.93 Da    PI: 11.5506
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY64943.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF38.71.3e-122361145
                HHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
      SRF-TF 11 vtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                +tfskRr gi KKA+EL +L++ae+ ++   + g 
  GAY64943.1  2 ITFSKRRSGIHKKASELVTLTGAEIGIVCSHHLGS 36
                7************************9997666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    
MITFSKRRSG IHKKASELVT LTGAEIGIVC SHHLGSLSHS GIPPQKPLRT RSIRMRTLIC  60
WLSSPLGEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.17e-09M-type_MADS family protein