PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY64944.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family M-type_MADS
Protein Properties Length: 241aa    MW: 27833.6 Da    PI: 7.5291
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY64944.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF53.72.7e-174290149
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                k+ien+  r +tfskRr gi KKA+EL +L++ae+ +++fs++gk + y
  GAY64944.1 42 KKIENEDDRMITFSKRRSGIDKKASELVTLTGAEIGIVVFSPSGKPFSY 90
                68******************************************96655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MHGLHGYLHV PMHFRYWLAV GFCFSFELAY VLIRGRQKIE VKKIENEDDR MITFSKRRSG  60
IDKKASELVT LTGAEIGIVV FSPSGKPFSY GHPSLEAVAN RFLGSSQEHP NDNTHPLVEA  120
HRRVRINELN QQHNELLRQV DEEKAREKIL KQNRKGRETQ PHWWETPVDE LNHQELLQMD  180
AAIDDLHKTF LAKLNEKTAA ASSSMAHWHF LCIFVINNVS HFPLNLAFVY RKSDEATSPN  240
D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.12e-40M-type_MADS family protein