PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY64946.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family M-type_MADS
Protein Properties Length: 93aa    MW: 10393.8 Da    PI: 9.8395
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY64946.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF48.51.1e-151563149
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                k ien+  r  tfsk r gi KKA+EL +L++ae+ +++fs  gk +++
  GAY64946.1 15 KNIENEDDRMMTFSKHRSGIYKKASELVTLTGAEIGIVLFSLPGKPFTF 63
                68****************************************9998888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MLAKKTRGRQ NIEMKNIENE DDRMMTFSKH RSGIYKKASE LVTLTGAEIG IVLFSLPGKP  60
FTFGHPSLEA VANRFLGSNQ QHPNDNTHPP GEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04100.16e-29M-type_MADS family protein