PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY64948.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family M-type_MADS
Protein Properties Length: 77aa    MW: 8277.59 Da    PI: 10.1712
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY64948.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF42.11.1e-132401149
                HHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF 11 vtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                +t+skRr gi KKA+EL +L+ +e+ +++ s +gk y +
  GAY64948.1  2 ITLSKRRSGIYKKASELVTLTSTEIGIVVSSLSGKPYSF 40
                7*********************************98877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 77 aa     Download sequence    
MITLSKRRSG IYKKASELVT LTSTEIGIVV SSLSGKPYSF GHPSIEAVVN RILGLTQPPN  60
DNSHPLAKAQ CQLLSVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.11e-18M-type_MADS family protein