PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY64980.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family LBD
Protein Properties Length: 106aa    MW: 12094.7 Da    PI: 4.4926
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY64980.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26024.38.7e-0815456999
      DUF260 69 ardPvyGavgvilklqqqleqlkaelallke 99
                ++dPvyG++g + +lq+q+++l+aela++++
  GAY64980.1 15 QSDPVYGCAGAVCHLQKQVSELQAELAKAQA 45
                58*************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MSYFLKLLES FRELQSDPVY GCAGAVCHLQ KQVSELQAEL AKAQAGLASM QSQQQNLIAL  60
ICMEMAQSQE QVLHRHQQQQ PQQQFIDTSC FLDEYSLGST WEPLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.14e-17LBD family protein