PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY65004.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 179aa    MW: 20807.1 Da    PI: 5.3504
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY65004.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM99.25.9e-3121302128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                   G++F+P+d el+ + Lk+k  + +++  + ik++ +i+++ePwdLp+  k+++e++  yfF + + ky++++r  r t++g Wk t kd ++ + ++
  GAY65004.1   2 ESGYKFQPSD-ELILRLLKEKRLNPHFSH-HPIKDIgHICSLEPWDLPTesKTESEDQVFYFFYEPRYKYRNSNRVDRRTEAGQWKITSKDSQIEA-GN 97 
                 67*******9.6888******99999888.78****99**********523555566677***********************************9.99 PP

         NAM  98 elvglkktLvfy.kg.rapkgektdWvmheyrl 128
                  l+g+kk L+fy +g +++ ++ktdWv+hey++
  GAY65004.1  98 GLTGTKKFLTFYcRGpDSKVPVKTDWVVHEYHA 130
                 9***********7555667788*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MESGYKFQPS DELILRLLKE KRLNPHFSHH PIKDIGHICS LEPWDLPTES KTESEDQVFY  60
FFYEPRYKYR NSNRVDRRTE AGQWKITSKD SQIEAGNGLT GTKKFLTFYC RGPDSKVPVK  120
TDWVVHEYHA KDDPRYEKEF VLCCITNGEA SAYVDDGSET NTADNDAWVE ERSVILSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.16e-20NAC family protein