PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY65006.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 107aa    MW: 12689.2 Da    PI: 8.4349
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY65006.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM69.21.1e-2121052104
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                   G++F+P++ el+ + Lk+k  + +++  + ik++ +i+++ePwdLp+  k+++e++  yfF + + ky++++r  r t++g Wk t kd ++ + +g
  GAY65006.1   2 ESGYKFQPSN-ELILRLLKEKRLNPRFSY-HPIKDIdHICSLEPWDLPTesKTESEDQVFYFFYEPRYKYRNSHRVDRRTEAGQWKITSKDSQIEAGNG 98 
                 67******96.7999***********999.78****66**********523555566677************************************999 PP

         NAM  98 elvglkk 104
                  +vg++k
  GAY65006.1  99 LTVGTQK 105
                 9999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    
MESGYKFQPS NELILRLLKE KRLNPRFSYH PIKDIDHICS LEPWDLPTES KTESEDQVFY  60
FFYEPRYKYR NSHRVDRRTE AGQWKITSKD SQIEAGNGLT VGTQKSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.16e-14NAC family protein