PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY65008.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 178aa    MW: 20965.9 Da    PI: 9.3419
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY65008.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM114.11.4e-3551323128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                 +GfrF+Pt+ee++ + Lkkk  + ++++ ++ike+d y+++PwdLp+  +++ eek wyf+++r  k+a++k+++r tksgyWk tgk  ++++k ++e
  GAY65008.1   5 VGFRFKPTNEEII-RLLKKKRLDPDFSV-HTIKEIDFYSFDPWDLPRhsEIQCEEKVWYFYCERYYKSAKSKQAHRRTKSGYWKVTGKGSDIKRKnSTE 101
                 7************.99*********999.78**************94357788999*************************************996677 PP

         NAM  99 lvglkktLvfy.kgrapkgektdWvmheyrl 128
                 ++g+kk+L f  + +a+k  kt+Wvmhe ++
  GAY65008.1 102 VIGTKKILPFCpRRSASKKAKTEWVMHEISV 132
                 8**********766889999********876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MDSLVGFRFK PTNEEIIRLL KKKRLDPDFS VHTIKEIDFY SFDPWDLPRH SEIQCEEKVW  60
YFYCERYYKS AKSKQAHRRT KSGYWKVTGK GSDIKRKNST EVIGTKKILP FCPRRSASKK  120
AKTEWVMHEI SVEDDPLYKK DFVVCRLERK RDGELSTSTS VEDQSSPDLT SCSTIIHD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27300.19e-34NAC family protein