PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY65010.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family NAC
Protein Properties Length: 112aa    MW: 13158.1 Da    PI: 8.6393
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY65010.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM60.55.6e-1951033106
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100
                 +G++F+P++e+++ + + +k  +++++  + ik++ di+++eP dL    k+e++ wyfF++ ++ky +++r++r tk+g  k t kd ++++ ++ lv
  GAY65010.1   5 MGYKFQPSNEQIL-YLMVEKRLNSHFSH-HPIKDIvDICSLEPGDLA---KSEDQVWYFFCEPHHKYMKSNRAHRRTKAGHGKITSKDSQIKA-RNGLV 97 
                 7***********9.44445555555555.6799988**********7...56899************************************99.66667 PP

         NAM 101 glkktL 106
                  +k  +
  GAY65010.1  98 DTKIFF 103
                 776655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    
MENLMGYKFQ PSNEQILYLM VEKRLNSHFS HHPIKDIVDI CSLEPGDLAK SEDQVWYFFC  60
EPHHKYMKSN RAHRRTKAGH GKITSKDSQI KARNGLVDTK IFFDFLPPWC CS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.32e-16NAC family protein