PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY65325.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 417aa MW: 47718.4 Da PI: 6.0889

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY65325.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50.6	6.3e-16	101	177	2	77
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwe 77 fY+eYAk vGF vr++++++ ++g t r++vCsk+g+r ++ + ++++r+ r+ trtgC+ ++++++++ + w+ GAY65325.1 101 FYHEYAKFVGFGVRRNTKRYD-KQGMLTGRQWVCSKQGFRPQKYLRlANRSREARPLTRTGCRVEFRISLNErKTAWK 177 9*************99998.7778**********9998877899999***************99788886 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MACTDNENSG ANFKDEMNEG TSFRTQTSNS NDWTDDETRE NATRLLQSSN NHDLEQQINV 60 DGPDENENEV TETRGVQTQE TIDNMEFVGK EFATEDEADH FYHEYAKFVG FGVRRNTKRY 120 DKQGMLTGRQ WVCSKQGFRP QKYLRLANRS REARPLTRTG CRVEFRISLN ERKTAWKYEQ 180 QAADVYTKAV FYMVREEIDK EGLLTATLIE EDMLSKTYQV KKFGNQHKEH TAENLPEIPN 240 CMILSRWRKD AKLEVIPSEF VNDVAQYMSV EARVGSIHTA CRGKSIDAYN MAIIDIHKLS 300 LRLEGMCSIA EPSGRKGERQ RAPLVKDPVV VLTKGAAKKL KVRPTEQRKC KKCREGGHTV 360 PLGTSSDILL QQNGDSMLGE SLDHMQVDLI GSNFPNSQYS TTSDINDYIN IWNYTDF

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MACTDNENSG ANFKDEMNEG TSFRTQTSNS NDWTDDETRE NATRLLQSSN NHDLEQQINV  60
DGPDENENEV TETRGVQTQE TIDNMEFVGK EFATEDEADH FYHEYAKFVG FGVRRNTKRY  120
DKQGMLTGRQ WVCSKQGFRP QKYLRLANRS REARPLTRTG CRVEFRISLN ERKTAWKYEQ  180
QAADVYTKAV FYMVREEIDK EGLLTATLIE EDMLSKTYQV KKFGNQHKEH TAENLPEIPN  240
CMILSRWRKD AKLEVIPSEF VNDVAQYMSV EARVGSIHTA CRGKSIDAYN MAIIDIHKLS  300
LRLEGMCSIA EPSGRKGERQ RAPLVKDPVV VLTKGAAKKL KVRPTEQRKC KKCREGGHTV  360
PLGTSSDILL QQNGDSMLGE SLDHMQVDLI GSNFPNSQYS TTSDINDYIN IWNYTDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	5e-10	FAR1 family protein