PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY65397.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family bHLH
Protein Properties Length: 252aa    MW: 28838 Da    PI: 7.8958
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY65397.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.52.8e-1466117255
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +  hn+ Er RR++iNs ++ Lr+llP a   + kKls  +++ ++ +YI +Lq
  GAY65397.1  66 KLYHNASERDRRKKINSLYSSLRSLLPVA--DQTKKLSIPATVSRVLKYIPELQ 117
                 567*************************6..48888***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MCALFPPFFP SLGWPLEINP ICHQQDYITE TIEESPQFPQ ESEPQAEFDR SASFSANSGD  60
PTMVKKLYHN ASERDRRKKI NSLYSSLRSL LPVADQTKKL SIPATVSRVL KYIPELQQQV  120
ERLMQKKEEL LSKISKPGEI SHQQHQRKIA IGSSLASISA SRLSDMEILI QISSYKVHKC  180
PLSKILFNLE EDGLVLVNAS FFESFQGRVF YNLHLQVKST YGLDCEVLNE KLKSFYNEKR  240
EDLFPSNFGC KN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.11e-57bHLH family protein