PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY65425.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family B3
Protein Properties Length: 147aa    MW: 16916.4 Da    PI: 9.1953
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY65425.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.82.5e-1058146598
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  ++s+  +++  ++p kfa+e+ +   +   +++ed + r+ ++  ++r+++ ++ l   W +  + n L+ gD+++F+ + r++f l+++vf+
  GAY65425.1  58 ILQSSDITHNAAYVPGKFANEFFSRDVK--SIKIEDDKKREHTLLNNWRRNG-GFALL--WAKLTRNNSLQKGDICIFEIVPRNGFLLKLSVFS 146
                 45788888888***********655555..59999*9999999888766665.66666..*******************998899988888886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MVEKNESDDY DEFDLWASLE EMGMCIARKE RTVTKEESRR AVKIAGSLRP KIPSFMVILQ  60
SSDITHNAAY VPGKFANEFF SRDVKSIKIE DDKKREHTLL NNWRRNGGFA LLWAKLTRNN  120
SLQKGDICIF EIVPRNGFLL KLSVFSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-14B3 family protein