PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY65460.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C2H2
Protein Properties Length: 224aa    MW: 24613.3 Da    PI: 6.3847
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY65460.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.000117193123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C + F++   L  H+++H
  GAY65460.1 71 YTCTFCRREFRSAQALGGHMNVH 93
                9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MAPELGLLSS TQHKKLAQSQ QNQPSPSLSP GKTWMLNQKR EPQEDDDSWE VRAFAEDTGN  60
IMGTTWPPRS YTCTFCRREF RSAQALGGHM NVHRRDRARL HHHQAQPHAS SSSSTLIIPT  120
TQEFTNSGYC LLYQLPNPNG GVFASTTMTA CAIDDSPSTL LSISPYPPNN LIGLPPSTNF  180
PAASQCYSTK DPLGSINDNS NACNESAIEE LDLELRLGQR PTPT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.12e-40C2H2 family protein