PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY65497.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family FAR1
Protein Properties Length: 277aa    MW: 31838.1 Da    PI: 7.8465
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY65497.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR193.52.7e-29116204290
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 fY+eYA+++GFs+r+ +s+ks+r+g+i++r++ C+keg++++++k+ + + r+r++ r gC+a++ vk+ek g+w+vtk+e+eHnH l 
  GAY65497.1 116 FYDEYARRAGFSTRIISSRKSERDGSIISRHLACNKEGFNANRRKSGRVQIRKRESIREGCRAMILVKREKPGRWVVTKFEKEHNHLLL 204
                 9*********************************************99999***********************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
SCDDEERTRE GGRACLECIC RPPVSRRATA TVVTGYRSYR VLFRCELFFK LLYVVFSSYY  60
CFSVDLEAPA EETPAEEKTV ITESPTGGES DVCEIDTRRE PYEGMVFESE DAAKIFYDEY  120
ARRAGFSTRI ISSRKSERDG SIISRHLACN KEGFNANRRK SGRVQIRKRE SIREGCRAMI  180
LVKREKPGRW VVTKFEKEHN HLLLSSGKDG PSPDEKDRKI RELSMELHRA NQKLEACQEQ  240
LQIVMSYIEE HAKCLSKTVE EAVKDIQKVE SGKQKEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.17e-50FAR1 family protein