PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY65498.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family FAR1
Protein Properties Length: 198aa    MW: 23051.2 Da    PI: 8.874
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY65498.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR182.95.5e-2625116191
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr...traetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                 +fY+ Y+++vGF++r++++++s ++++i+ r++vCskeg+r+ + ++  + +r   +r+ tr gC+a+l++  ++ gkw+++ +++eHnHel+p
  GAY65498.1  25 EFYEMYGRRVGFTIRNNRTRRSLKDNSIIGREYVCSKEGFRAGKCTN--RGSRvllPRPATREGCNAMLRIAAKDGGKWVIYGFVKEHNHELNP 116
                 6****************************************999888..33333569**********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MFPLTSESTE PYIGMEFDSA EDAREFYEMY GRRVGFTIRN NRTRRSLKDN SIIGREYVCS  60
KEGFRAGKCT NRGSRVLLPR PATREGCNAM LRIAAKDGGK WVIYGFVKEH NHELNPSKIP  120
PRRSHRIAFS EDVKDLKIRE LSTELHHEKK KSAAYQEQLC MVLKFIEEHT QRMSLKVQVV  180
TNNMQELESE ERESSYPD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.16e-46FAR1 family protein