PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY65499.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 250aa MW: 28838.5 Da PI: 5.1442

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY65499.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.5	1.7e-26	82	172	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY eYAk++GF++r+++ ++s +n i+ r+fvCs+eg+r+ ++ +++ +r++tr gCka++++ ++ gkw vtk++ eHnH+l GAY65499.1 82 DFYYEYAKRTGFTIRTNRIRHSLKNMAIIGRDFVCSREGFRAAKHALrKDRVLPPRPVTREGCKAMIRLAARDGGKWAVTKFVREHNHKLL 172 6***************************************9998823333449********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MACSAGHEFI DGEGCSDNDT LESFDEHDTT EDGLLQHYDS HDVINDELNV VIPSMEGFTA 60 DSSESLEPYM GMTFPSLEDA RDFYYEYAKR TGFTIRTNRI RHSLKNMAII GRDFVCSREG 120 FRAAKHALRK DRVLPPRPVT REGCKAMIRL AARDGGKWAV TKFVREHNHK LLTHCKFPGE 180 LPIVNILSEE EKDKKIRDLY NELQRERERS AAIQQQLRLI LKDLEEHAEI MSIRVEDIVN 240 SLREIELDEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	7e-46	FAR1 family protein