PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY65632.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family C3H
Protein Properties Length: 184aa    MW: 20222.8 Da    PI: 9.4172
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY65632.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.15.6e-07141161526
                 --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                  C++++  G C +Gd C+F H+
  GAY65632.1 141 VCCHWLL-GNCVRGDECRFLHS 161
                 6******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MGSSIFFEGI VQTHNQRERS FFTPINGRAG GGVGGGWPTN KVVCVYFLEG RCNRNPCRFA  60
HTESSSLLLS NPKLAKKSPP SYNRLKNNLW VSSGSEDRIP HVRNRENPGY TGPKNSSSAS  120
STVSDESGDK STSKKTTLKN VCCHWLLGNC VRGDECRFLH SWFCGEGLTM LAKLEGHEKA  180
LLGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25440.16e-17C3H family protein