PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY65633.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family FAR1
Protein Properties Length: 251aa    MW: 28501 Da    PI: 6.7217
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY65633.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1911.6e-2887174291
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                 fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++  k  r+raetr+gC+a++ v+k ++g+w+vtk+++eH+H+l+p
  GAY65633.1  87 FYNAYATRVGFVIRVSKLSRSRRDGSAIGRALVCNKEGYRLPDKRE--KIVRQRAETRVGCRAMILVRKVNSGQWVVTKFVKEHTHPLTP 174
                 ******************************************9988..9**************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MDYRIDSNVN GELVGNSVDV GDRVGNEDEI YRTSVEVTLH QDQDNKVDPD SLALETIPEG  60
IPSVASVQAD EPYVGQQFES EAAAHAFYNA YATRVGFVIR VSKLSRSRRD GSAIGRALVC  120
NKEGYRLPDK REKIVRQRAE TRVGCRAMIL VRKVNSGQWV VTKFVKEHTH PLTPGKGRKD  180
CIYDQYPNEH DKIRELSQQL ALEKKRAANY KRHLELIVEQ IEEHNESLAK KIQHVVDSVK  240
NIEDEEQKSC T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-102FAR1 family protein