PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GAY65647.1

Organism

Citrus unshiu

Taxonomic ID

55188

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus

Family

FAR1

Protein Properties

Length: 422aa MW: 49003.8 Da PI: 6.9921

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GAY65647.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.4	4.9e-23	72	155	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn YAke GF vr+s++ ++ +++e ++ ++ Cs g++++++ + r+r+etrtgC a++k +++++++w+++++eleHnH l+p GAY65647.1 72 FYNCYAKEQGFGVRVSNTWYR-KSREKYRGKLSCSSAGFKKKSEAN-----RPRPETRTGCPAMIKFRLMETKRWRIIEVELEHNHLLSP 155 9*************99997.66669**********99888.....*********************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MTCLYVLRQL YVVKMDEVSL NTEPVGDDDA DDFEVVGDCA MTEYVGQTGI IQNPLPPAVG 60 MEFETYDDVY YFYNCYAKEQ GFGVRVSNTW YRKSREKYRG KLSCSSAGFK KKSEANRPRP 120 ETRTGCPAMI KFRLMETKRW RIIEVELEHN HLLSPRSGKF YKSHKHIGIG TKRTLQLDSA 180 EEVQKIKLFR TLIIDTEGNG YLDKNTPLKE FLDKYDQALR ANYQLEALAD MDSRNSSCIQ 240 KPRCYYEFQL SKLCTNEMLR KFQTEVEAMY SCYSTKHVSA DGPITYIVKE EFEVGSNEKD 300 SRAFDVLYNA SDLEVLCVCG LFNCRGYLCR HILCVLNQSG VQEIPSQYIL SRWRKDVKRS 360 YVLDHSCSGI DIKNPVHRYD DLYKRIVQVV EEGRQSQDRY KVTLQALDEI LNKLHLVEDH 420 QV

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MTCLYVLRQL YVVKMDEVSL NTEPVGDDDA DDFEVVGDCA MTEYVGQTGI IQNPLPPAVG  60
MEFETYDDVY YFYNCYAKEQ GFGVRVSNTW YRKSREKYRG KLSCSSAGFK KKSEANRPRP  120
ETRTGCPAMI KFRLMETKRW RIIEVELEHN HLLSPRSGKF YKSHKHIGIG TKRTLQLDSA  180
EEVQKIKLFR TLIIDTEGNG YLDKNTPLKE FLDKYDQALR ANYQLEALAD MDSRNSSCIQ  240
KPRCYYEFQL SKLCTNEMLR KFQTEVEAMY SCYSTKHVSA DGPITYIVKE EFEVGSNEKD  300
SRAFDVLYNA SDLEVLCVCG LFNCRGYLCR HILCVLNQSG VQEIPSQYIL SRWRKDVKRS  360
YVLDHSCSGI DIKNPVHRYD DLYKRIVQVV EEGRQSQDRY KVTLQALDEI LNKLHLVEDH  420
QV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	9e-65	FAR1 family protein