PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY66135.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family GRAS
Protein Properties Length: 236aa    MW: 26169 Da    PI: 7.5342
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY66135.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS280.35.8e-861235129374
        GRAS 129 lqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdev 227
                 +qaLa+Rp+g+p lRiTgvg+      e+ +etg+ L+++A++l+vpfef++ v ++ledl++++++ + gEalaVn v +lhr++  s +l +    +
  GAY66135.1   1 MQALAARPGGAPFLRITGVGA----TIESAKETGRCLTELAHSLHVPFEFHP-VGEQLEDLKPHMFNRRVGEALAVNAVNRLHRVP--SNCLGN----L 88 
                 9********************....99*************************.7*******************************9..666666....* PP

        GRAS 228 LklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkp 326
                 L ++++  P++v++veqea+hn++ Fl rfleal+yysa+fdsl+a++p++s +r+kvE+ ++++ei+n+vaceg er++rhe+lekWr+ +e  GF+ 
  GAY66135.1  89 LAMIRDQAPNIVTIVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPDSAQRAKVEQYIFAPEIRNIVACEGGERTARHERLEKWRKIMEGKGFRG 187
                 *************************************************************************************************** PP

        GRAS 327 vplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 vpls +a++q k ll  ++ dgyr+ e++g+l+lgW+dr+L+++SaWr
  GAY66135.1 188 VPLSANAVTQSKILLGLYSCDGYRLTEDNGCLLLGWQDRALLAASAWR 235
                 ***********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MQALAARPGG APFLRITGVG ATIESAKETG RCLTELAHSL HVPFEFHPVG EQLEDLKPHM  60
FNRRVGEALA VNAVNRLHRV PSNCLGNLLA MIRDQAPNIV TIVEQEASHN GPYFLGRFLE  120
ALHYYSAIFD SLDATFPPDS AQRAKVEQYI FAPEIRNIVA CEGGERTARH ERLEKWRKIM  180
EGKGFRGVPL SANAVTQSKI LLGLYSCDGY RLTEDNGCLL LGWQDRALLA ASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.12e-65GRAS family protein