PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GAY66230.1
Organism
Citrus unshiu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Family MYB_related
Protein Properties Length: 50aa    MW: 5952.92 Da    PI: 10.7797
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GAY66230.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.55.6e-071450143
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksr 43
                     +g+W +eEd++l  ++ ++G  +W+     ++  +++k+c++r
       GAY66230.1 14 KGAWRKEEDDKLRAYILKYGHWNWAQ----LP--KSGKSCRLR 50
                     79******************778887....77..788888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 50 aa     Download sequence    
MVRAPTYDGR GMKKGAWRKE EDDKLRAYIL KYGHWNWAQL PKSGKSCRLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65230.15e-15MYB family protein